Andrew Charlwood ad10b374cb feat: integrate Snowflake-direct indication lookup into CLI refresh (Task 1.2, 2.3) ...

Replace batch_lookup_indication_groups() with get_patient_indication_groups()
for indication chart processing. The new approach:

- Extracts unique PseudoNHSNoLinked values from HCD data
- Queries Snowflake directly using the cluster CTE
- Builds indication_df mapping UPID → Search_Term (matched) or Directory (fallback)
- Logs coverage statistics (diagnosis % vs fallback %)

This completes the integration of the new Snowflake-direct GP lookup approach.

2026-02-05 17:06:34 +00:00

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