Files
HighCostDrugsDemo/data/include.csv
T
Andrew Charlwood adc1dbfc58 feat: complete Task 2.2 - test refresh pipeline with Snowflake data
Tested full refresh pipeline end-to-end with real Snowflake data:
- Fixed trust filter to read Name column from defaultTrusts.csv
- Fixed Decimal type handling in calculate_cost_per_patient_per_annum
- Fixed array handling in convert_to_records for average_administered
- Added required reference CSV files to data/ directory
- Configured Snowflake connection (account, warehouse, user)

Results:
- Snowflake fetch: 656,695 records in ~7s
- Transformations: 519,848 records after UPID/drug/directory
- Pathway nodes: 293 for all_6mo (8 trusts, 14 directories)
- Total processing time: ~6.2 minutes
2026-02-05 00:20:12 +00:00

176 lines
2.4 KiB
CSV

Drug,Include
ABATACEPT,1
ACALABRUTINIB,1
ADALIMUMAB,1
AFLIBERCEPT,1
ALIROCUMAB,1
ALITRETINOIN,0
AMIKACIN,0
AMPHOTERICIN B LIPOSOMAL,0
ANAKINRA,0
ANDEXANET ALFA,0
ANIDULAFUNGIN,0
APALUTAMIDE,0
APOMORPHINE,0
APREMILAST,1
ATEZOLIZUMAB,1
AVELUMAB,0
AXITINIB,0
AZACITIDINE,0
AZATHIOPRINE,0
BACILLUS CALMETTE-GUERIN,0
BARICITINIB,1
BASILIXIMAB,0
BENDAMUSTINE ,0
BENRALIZUMAB,0
BEROTRALSTAT,0
BEVACIZUMAB,1
BEXAROTENE,0
BIMEKIZUMAB,1
BLEOMYCIN,0
BORTEZOMIB,0
BOTULINUM A TOXIN,1
BRENTUXIMAB VEDOTIN ,0
BRODALUMAB,1
BUSULFAN ,0
C1-ESTERASE INHIBITOR ,0
CABOZANTINIB,0
CAPECITABINE,0
CARBOPLATIN,0
CARFILZOMIB,0
CERTOLIZUMAB PEGOL,1
CETUXIMAB,0
CHLORAMBUCIL,0
CICLOSPORIN,0
CINACALCET,0
CISPLATIN,0
COLISTIMETHATE,0
COLISTIN,0
COPAXONE,0
CYCLOPHOSPHAMIDE,0
DARBEPOETIN ALFA,0
DAROLUTAMIDE,0
DASATINIB,0
DEFERASIROX,0
DENOSUMAB,1
DESFERRIOXAMINE,0
DEXAMETHASONE,1
DIGOXIN IMMUNE FAB,0
DIMETHYL FUMARATE,1
DOCETAXEL,1
DOXORUBICIN,0
DUPILUMAB,1
ECULIZUMAB,0
EFUDIX,0
ELTROMBOPAG,0
EMTRICITABINE,0
ENZALUTAMIDE,0
EPIRUBICIN,0
EPOETIN,0
EPOETIN ALFA,0
EPOETIN BETA,0
ERENUMAB,1
ETANERCEPT,1
EVOLOCUMAB,1
FARICIMAB,1
FIDAXOMICIN,0
FILGOTINIB,1
FILGRASTIM,0
FLUOCINOLONE,1
FLUOCINOLONE ACETONIDE,1
FLUOROURACIL,0
FOMEPIZOLE,0
FREMANEZUMAB,1
FULVESTRANT,0
GALCANEZUMAB,1
GEMCITABINE,0
GENERIC,0
GOLIMUMAB,1
GUSELKUMAB,1
HYDROXYCARBAMIDE,0
IBRUTINIB,0
IDARUBICIN,0
IDARUCIZUMAB,1
IFOSFAMIDE,0
ILOPROST,0
ILOPROST ,0
IMATINIB,1
IMMUNOGLOBULIN,1
INFLIXIMAB,1
INSULIN HUMAN,0
IRINOTECAN,0
ISATUXIMAB,0
IXEKIZUMAB,1
JYSELECA,0
KAFTRIO,0
LANREOTIDE,0
LENALIDOMIDE,0
LENOGRASTIM,0
LETERMOVIR,0
LIOTHYRONINE,0
LUCENTIS,1
MEPOLIZUMAB,0
METHOTREXATE,0
METRELEPTIN,0
MITOMYCIN,0
MOFETIL,0
MOLNUPIRAVIR,0
MYCOPHENOLATE,0
NERATINIB,0
NIRAPARIB,0
NORDITROPIN,0
NUSINERSEN,0
OBINUTUZUMAB,1
OCRIPLASMIN,0
OCTREOTIDE,1
OLAPARIB,0
OMALIZUMAB,1
OMNITROPE,0
OXALIPLATIN,0
PACLITAXEL,0
PALBOCICLIB,0
PALIVIZUMAB,0
PARENTERAL,0
PEGINTERFERON,0
RANIBIZUMAB,1
RASBURICASE,0
REMDESIVIR,0
REMICADE,1
RILUZOLE,1
RISANKIZUMAB,1
RITUXIMAB,1
RIXATHON,1
ROMIPLOSTIM,0
SACITUZUMAB,1
SARILUMAB,1
SECUKINUMAB,1
SERVICE,0
SEVELAMER,0
SILDENAFIL,0
SIMPONI,0
SIROLIMUS,0
SOLRIAMFETOL,0
SOMATROPIN,0
SOMATROPINŸ,0
SOTROVIMAB,0
STIRIPENTOL,0
TACROLIMUS,0
TERIPARATIDE,1
TILDRAKIZUMAB,1
TOCILIZUMAB,1
TOFACITINIB,1
TOLVAPTAN,0
TRASTUZUMAB,0
TRUXIMA,0
UNIT,0
UPADACITINIB,1
USTEKINUMAB,1
VABYSMO,0
VANCOMYCIN,0
VEDOLIZUMAB,1
VERTEPORFIN,0
VINBLASTINE,0
VISMODEGIB,0
VORICONAZOLE,0
ZANUBRUTINIB,0