Andrew Charlwood
61 lines
1.3 KiB
TOML
61 lines
1.3 KiB
TOML
[project]
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name = "patient-pathway-analysis"
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version = "0.1.0"
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description = "Add your description here"
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readme = "README.md"
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requires-python = ">=3.10"
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dependencies = [
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"dash>=2.14.0",
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"dash-mantine-components>=0.14.0",
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"fastparquet>=2024.11.0",
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"numpy>=1.25.0",
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"pandas>=2.0.3",
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"pillow>=10.0.0",
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"plotly>=5.15.0",
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"pyarrow>=20.0.0",
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"pyinstaller>=6.18.0",
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"pywebview>=6.1",
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"snowflake-connector-python>=3.0.0",
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"tomli>=2.0.0",
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]
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[project.optional-dependencies]
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test = [
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"pytest>=8.0.0",
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"pytest-cov>=4.0.0",
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]
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[tool.pytest.ini_options]
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pythonpath = ["."]
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testpaths = ["tests"]
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python_files = ["test_*.py"]
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python_classes = ["Test*"]
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python_functions = ["test_*"]
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addopts = [
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"-v",
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"--tb=short",
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"--strict-markers",
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]
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markers = [
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"slow: marks tests as slow (deselect with '-m \"not slow\"')",
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"integration: marks tests as integration tests (require external resources)",
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"largedata: marks tests that require large datasets (deselect with '-m \"not largedata\"')",
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]
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[tool.coverage.run]
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source = ["core", "data_processing", "analysis", "visualization"]
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branch = true
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omit = [
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"*/tests/*",
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"*/__pycache__/*",
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]
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[tool.coverage.report]
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exclude_lines = [
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"pragma: no cover",
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"def __repr__",
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"raise NotImplementedError",
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"if TYPE_CHECKING:",
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]
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show_missing = true
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